STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_3884DNA-binding protein rap1. (755 aa)    
Predicted Functional Partners:
B9Z65_309
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.975
B9Z65_632
Polyubiquitin.
    
 0.940
B9Z65_616
Uncharacterized protein.
   
 0.915
B9Z65_5687
Tumor susceptibility protein 101 protein.
   
 0.890
B9Z65_7826
AMSH-like protease sst2.
    
 0.887
B9Z65_7903
Ubiquitin carboxyl-terminal hydrolase 8.
    
 0.863
B9Z65_40
BZIP domain-containing protein.
   
 0.839
B9Z65_6507
Ubiquitin-40S ribosomal protein S27a.
   
 0.839
B9Z65_2544
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.813
B9Z65_6176
Uncharacterized protein.
    
 0.811
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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