STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_3918Uncharacterized protein. (642 aa)    
Predicted Functional Partners:
B9Z65_5143
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.820
B9Z65_6235
E3 ubiquitin-protein ligase RBX1.
    
 0.736
B9Z65_5969
Cullin-1; Belongs to the cullin family.
    
  0.582
B9Z65_5354
Cullin-3; Belongs to the cullin family.
    
  0.582
B9Z65_2694
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.565
B9Z65_2549
3'-5' exonuclease domain-containing protein.
      
 0.534
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.