STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_6252DNA repair protein. (380 aa)    
Predicted Functional Partners:
B9Z65_4363
Transcription elongation factor S-II.
    
 0.983
B9Z65_8715
DNA repair protein rad16.
    
 0.981
B9Z65_2207
Asparagine synthetase domain-containing protein.
    
 0.980
B9Z65_5178
DNA repair helicase rad15.
    
 0.980
B9Z65_5623
Putative DNA repair helicase ercc3.
    
 0.968
B9Z65_8610
DNA repair protein rad13.
    
 0.961
B9Z65_5761
RNA polymerase II transcription factor B subunit 1.
    
 0.957
B9Z65_6540
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.948
B9Z65_3576
Uncharacterized protein.
    
 0.943
B9Z65_3971
Uncharacterized protein.
   
 0.912
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.