STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_6380SAGA complex subunit spt3. (339 aa)    
Predicted Functional Partners:
B9Z65_1827
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.995
B9Z65_5441
TFIID_20kDa domain-containing protein.
    
 0.995
B9Z65_3675
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.995
B9Z65_924
SGF29 C-terminal domain-containing protein.
    
 0.995
B9Z65_1626
Uncharacterized protein.
   
 0.994
B9Z65_5617
TAF domain-containing protein.
    
 0.994
B9Z65_3199
Uncharacterized protein.
    
 0.994
B9Z65_7894
Transcription initiation factor TFIID subunit 5.
    
 0.994
B9Z65_5064
Bromo domain-containing protein.
    
 0.993
B9Z65_827
Transcriptional adapter 2.
    
 0.993
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.