STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_1009LETM1 domain-containing protein mdm28, mitochondrial. (536 aa)    
Predicted Functional Partners:
B9Z65_4400
Sorting nexin-4.
 
      0.707
B9Z65_1496
Ras-like protein 4.
    
  0.656
B9Z65_771
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
 
      0.611
B9Z65_6444
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
 
  
   0.586
B9Z65_4268
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.538
B9Z65_3422
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.536
B9Z65_1146
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.534
B9Z65_6127
60S ribosomal protein L2.
    
 
 0.531
B9Z65_295
37S ribosomal protein MRP4, mitochondrial; Belongs to the universal ribosomal protein uS2 family.
   
   0.512
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.512
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.