STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z65_914CMP/dCMP-type deaminase domain-containing protein. (168 aa)    
Predicted Functional Partners:
B9Z65_6918
PseudoU_synth_2 domain-containing protein.
 
  
 0.917
B9Z65_2899
CMP/dCMP-type deaminase domain-containing protein.
   
 0.893
B9Z65_1205
tRNA modification GTPase GTPBP3, mitochondrial.
   
 
 0.883
B9Z65_3206
TRUD domain-containing protein.
  
 
 0.866
B9Z65_1943
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.855
B9Z65_3151
Adenosine kinase.
    
 0.855
B9Z65_553
RibD_C domain-containing protein.
    
 0.855
B9Z65_8485
Uncharacterized protein.
  
 
  0.839
B9Z65_7108
Uncharacterized protein.
    
  0.801
B9Z65_157
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
    
  0.801
Your Current Organism:
Elsinoe australis
NCBI taxonomy Id: 40998
Other names: E. australis, Sphaceloma australis
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