STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppA_1Stage 0 sporulation protein KA. (548 aa)    
Predicted Functional Partners:
oppB_1
Oligopeptide transport system permease protein oppB.
 
 0.976
oppC_1
Oligopeptide transport system permease protein oppC.
 
 0.974
gsiA_5
Glutathione import ATP-binding protein GsiA.
 
 0.965
gsiA_1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.953
oppB_2
Oligopeptide transport system permease protein oppB.
 
 0.953
oppC_2
Oligopeptide transport system permease protein oppC.
 
 0.953
gsiA_2
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.950
gsiD_1
Glutathione transport system permease protein gsiD.
 
 0.943
gsiD_2
Glutathione transport system permease protein gsiD.
 
 0.931
gsiA_10
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.921
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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