Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP02780.1 | CUP55598.1 | ERS852525_00402 | ERS852525_02159 | Ribonuclease Z. | ABC-type transport system involved in multi-copper enzyme maturation%2C permease component. | 0.401 |
CUP02780.1 | glmU | ERS852525_00402 | ERS852525_00403 | Ribonuclease Z. | Bifunctional protein GlmU. | 0.773 |
CUP02780.1 | ppk_2 | ERS852525_00402 | ERS852525_00405 | Ribonuclease Z. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.509 |
CUP02780.1 | rny | ERS852525_00402 | ERS852525_00399 | Ribonuclease Z. | Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.507 |
CUP02780.1 | topB_1 | ERS852525_00402 | ERS852525_00404 | Ribonuclease Z. | DNA topoisomerase 3. | 0.773 |
CUP55598.1 | CUP02780.1 | ERS852525_02159 | ERS852525_00402 | ABC-type transport system involved in multi-copper enzyme maturation%2C permease component. | Ribonuclease Z. | 0.401 |
glmU | CUP02780.1 | ERS852525_00403 | ERS852525_00402 | Bifunctional protein GlmU. | Ribonuclease Z. | 0.773 |
glmU | ppk_2 | ERS852525_00403 | ERS852525_00405 | Bifunctional protein GlmU. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.521 |
glmU | topB_1 | ERS852525_00403 | ERS852525_00404 | Bifunctional protein GlmU. | DNA topoisomerase 3. | 0.789 |
ppk_2 | CUP02780.1 | ERS852525_00405 | ERS852525_00402 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Ribonuclease Z. | 0.509 |
ppk_2 | glmU | ERS852525_00405 | ERS852525_00403 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Bifunctional protein GlmU. | 0.521 |
ppk_2 | topB_1 | ERS852525_00405 | ERS852525_00404 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | DNA topoisomerase 3. | 0.509 |
rny | CUP02780.1 | ERS852525_00399 | ERS852525_00402 | Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | Ribonuclease Z. | 0.507 |
topB_1 | CUP02780.1 | ERS852525_00404 | ERS852525_00402 | DNA topoisomerase 3. | Ribonuclease Z. | 0.773 |
topB_1 | glmU | ERS852525_00404 | ERS852525_00403 | DNA topoisomerase 3. | Bifunctional protein GlmU. | 0.789 |
topB_1 | ppk_2 | ERS852525_00404 | ERS852525_00405 | DNA topoisomerase 3. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.509 |