STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP17307.1Uncharacterised protein. (74 aa)    
Predicted Functional Partners:
CUP17247.1
Uncharacterised protein.
       0.773
CUP17263.1
Uncharacterised protein.
       0.773
CUP17275.1
YopX protein.
       0.773
CUP17337.1
Uncharacterised protein.
       0.678
CUP17352.1
Uncharacterised protein.
       0.678
CUP17208.1
Uncharacterised protein.
       0.456
CUP17222.1
Uncharacterised protein.
       0.456
CUP17383.1
Uncharacterised protein.
       0.401
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.