STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdBGlycine reductase complex component B subunit gamma. (350 aa)    
Predicted Functional Partners:
grdE
Glycine reductase complex component B subunits alpha and beta.
 
  
 0.968
CUP18596.1
Uncharacterised protein.
 
   
 0.909
grdA_2
Glycine/sarcosine/betaine reductase complex component A.
 
   
 0.908
grdC
Glycine/sarcosine/betaine reductase complex component C subunit beta.
 
   
 0.879
grdD
Glycine/sarcosine/betaine reductase complex component C subunit alpha.
 
   
 0.879
grdA_1
Glycine/sarcosine/betaine reductase complex component A.
 
     0.848
trxB_2
Thioredoxin reductase.
 
   
 0.730
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
 
   
 0.715
prdA_3
D-proline reductase proprotein prdA.
 
  
 0.477
CUP73264.1
Proline racemase; Belongs to the proline racemase family.
    
 0.415
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.