STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP19667.1Uncharacterised protein. (200 aa)    
Predicted Functional Partners:
mbtB
Phenyloxazoline synthase MbtB.
  
  
 0.967
dhbE
2%2C3-dihydroxybenzoate-AMP ligase.
  
  
 0.868
ydaF
Putative ribosomal N-acetyltransferase YdaF.
      0.739
CUP10388.1
Alcohol acetyltransferase.
 
 
 0.728
CUP19638.1
Uncharacterised protein.
       0.671
CUP33367.1
Putative acetyltransferase.
 
      0.658
CUP19696.1
Uncharacterized conserved protein.
       0.625
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
    0.540
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.501
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.433
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.