STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP19736.1Transcriptional regulator%2C y4mF family. (153 aa)    
Predicted Functional Partners:
CUP19722.1
Uncharacterised protein.
       0.727
immR_7
HTH-type transcriptional regulator immR.
  
     0.695
immR_12
HTH-type transcriptional regulator immR.
  
     0.660
ygaD
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.502
CUO93081.1
Transcriptional repressor DicA.
  
     0.488
CUP42976.1
Transcriptional repressor DicA.
  
     0.477
CUP19696.1
Uncharacterized conserved protein.
       0.441
porA
Pyruvate synthase subunit porA.
    
  0.407
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.