Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP04065.1 | CUP24514.1 | ERS852525_00455 | ERS852525_01140 | Uncharacterised protein. | Uncharacterised protein. | 0.461 |
CUP04065.1 | glf | ERS852525_00455 | ERS852525_01141 | Uncharacterised protein. | UDP-galactopyranose mutase. | 0.940 |
CUP04065.1 | rfbC | ERS852525_00455 | ERS852525_01158 | Uncharacterised protein. | dTDP-4-dehydrorhamnose 3%2C5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.947 |
CUP04065.1 | rffG | ERS852525_00455 | ERS852525_01160 | Uncharacterised protein. | dTDP-glucose 4%2C6-dehydratase 2; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.947 |
CUP04065.1 | rmlA1 | ERS852525_00455 | ERS852525_01161 | Uncharacterised protein. | Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.636 |
CUP24514.1 | CUP04065.1 | ERS852525_01140 | ERS852525_00455 | Uncharacterised protein. | Uncharacterised protein. | 0.461 |
CUP24514.1 | CUP24737.1 | ERS852525_01140 | ERS852525_01148 | Uncharacterised protein. | ABC-2 type transporter. | 0.441 |
CUP24514.1 | glf | ERS852525_01140 | ERS852525_01141 | Uncharacterised protein. | UDP-galactopyranose mutase. | 0.819 |
CUP24514.1 | rfbC | ERS852525_01140 | ERS852525_01158 | Uncharacterised protein. | dTDP-4-dehydrorhamnose 3%2C5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.523 |
CUP24514.1 | rffG | ERS852525_01140 | ERS852525_01160 | Uncharacterised protein. | dTDP-glucose 4%2C6-dehydratase 2; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.613 |
CUP24514.1 | rmlA1 | ERS852525_01140 | ERS852525_01161 | Uncharacterised protein. | Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.547 |
CUP24737.1 | CUP24514.1 | ERS852525_01148 | ERS852525_01140 | ABC-2 type transporter. | Uncharacterised protein. | 0.441 |
CUP24737.1 | glf | ERS852525_01148 | ERS852525_01141 | ABC-2 type transporter. | UDP-galactopyranose mutase. | 0.803 |
CUP24737.1 | glfT2_1 | ERS852525_01148 | ERS852525_01145 | ABC-2 type transporter. | UDP-galactofuranosyl transferase GlfT2. | 0.839 |
CUP24737.1 | glfT2_2 | ERS852525_01148 | ERS852525_01146 | ABC-2 type transporter. | UDP-galactofuranosyl transferase GlfT2. | 0.839 |
galE | galT | ERS852525_01924 | ERS852525_00328 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Galactose-1-phosphate uridylyltransferase. | 0.995 |
galE | glf | ERS852525_01924 | ERS852525_01141 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | UDP-galactopyranose mutase. | 0.924 |
galE | rfbC | ERS852525_01924 | ERS852525_01158 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | dTDP-4-dehydrorhamnose 3%2C5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.641 |
galE | rffG | ERS852525_01924 | ERS852525_01160 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | dTDP-glucose 4%2C6-dehydratase 2; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.704 |
galE | rmlA1 | ERS852525_01924 | ERS852525_01161 | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.533 |
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