STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP26568.1Recombinase. (390 aa)    
Predicted Functional Partners:
CUO96442.1
Recombinase.
  
     0.770
CUP13835.1
Transposase and inactivated derivatives.
  
     0.730
CUP16676.1
Resolvase%2C N terminal domain.
  
     0.674
CUP26597.1
Type I restriction-modification system methyltransferase subunit.
       0.556
CUP26612.1
Type I restriction modification DNA specificity domain.
       0.556
CUP45501.1
Resolvase%2C N terminal domain.
  
     0.551
hsdR_2
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.526
CUP26689.1
Uncharacterised protein.
       0.509
tnpR
Transposon Tn1000 resolvase.
  
     0.473
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.