Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO96127.1 | CUP26597.1 | ERS852525_00182 | ERS852525_01194 | EcoKI restriction-modification system protein HsdS. | Type I restriction-modification system methyltransferase subunit. | 0.775 |
CUO96127.1 | CUP26612.1 | ERS852525_00182 | ERS852525_01195 | EcoKI restriction-modification system protein HsdS. | Type I restriction modification DNA specificity domain. | 0.812 |
CUO96127.1 | CUP89796.1 | ERS852525_00182 | ERS852525_03338 | EcoKI restriction-modification system protein HsdS. | Type I restriction modification DNA specificity domain. | 0.928 |
CUO96127.1 | hsdM | ERS852525_00182 | ERS852525_00183 | EcoKI restriction-modification system protein HsdS. | Type I restriction-modification system methyltransferase subunit. | 0.878 |
CUO96127.1 | hsdR_2 | ERS852525_00182 | ERS852525_01196 | EcoKI restriction-modification system protein HsdS. | Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.914 |
CUO96127.1 | vspIM | ERS852525_00182 | ERS852525_01051 | EcoKI restriction-modification system protein HsdS. | Modification methylase VspI. | 0.705 |
CUP19869.1 | CUP26612.1 | ERS852525_01009 | ERS852525_01195 | DNA methylase. | Type I restriction modification DNA specificity domain. | 0.706 |
CUP19869.1 | CUP89796.1 | ERS852525_01009 | ERS852525_03338 | DNA methylase. | Type I restriction modification DNA specificity domain. | 0.706 |
CUP19869.1 | hsdR_2 | ERS852525_01009 | ERS852525_01196 | DNA methylase. | Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.641 |
CUP26597.1 | CUO96127.1 | ERS852525_01194 | ERS852525_00182 | Type I restriction-modification system methyltransferase subunit. | EcoKI restriction-modification system protein HsdS. | 0.775 |
CUP26597.1 | CUP26612.1 | ERS852525_01194 | ERS852525_01195 | Type I restriction-modification system methyltransferase subunit. | Type I restriction modification DNA specificity domain. | 0.992 |
CUP26597.1 | CUP26689.1 | ERS852525_01194 | ERS852525_01197 | Type I restriction-modification system methyltransferase subunit. | Uncharacterised protein. | 0.702 |
CUP26597.1 | CUP89796.1 | ERS852525_01194 | ERS852525_03338 | Type I restriction-modification system methyltransferase subunit. | Type I restriction modification DNA specificity domain. | 0.913 |
CUP26597.1 | hsdR_2 | ERS852525_01194 | ERS852525_01196 | Type I restriction-modification system methyltransferase subunit. | Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.976 |
CUP26597.1 | vspIM | ERS852525_01194 | ERS852525_01051 | Type I restriction-modification system methyltransferase subunit. | Modification methylase VspI. | 0.746 |
CUP26612.1 | CUO96127.1 | ERS852525_01195 | ERS852525_00182 | Type I restriction modification DNA specificity domain. | EcoKI restriction-modification system protein HsdS. | 0.812 |
CUP26612.1 | CUP19869.1 | ERS852525_01195 | ERS852525_01009 | Type I restriction modification DNA specificity domain. | DNA methylase. | 0.706 |
CUP26612.1 | CUP26597.1 | ERS852525_01195 | ERS852525_01194 | Type I restriction modification DNA specificity domain. | Type I restriction-modification system methyltransferase subunit. | 0.992 |
CUP26612.1 | CUP26689.1 | ERS852525_01195 | ERS852525_01197 | Type I restriction modification DNA specificity domain. | Uncharacterised protein. | 0.702 |
CUP26612.1 | CUP34407.1 | ERS852525_01195 | ERS852525_01455 | Type I restriction modification DNA specificity domain. | DNA methylase. | 0.706 |
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