STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdR_2Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1138 aa)    
Predicted Functional Partners:
CUP26597.1
Type I restriction-modification system methyltransferase subunit.
 
 
 0.976
CUP26612.1
Type I restriction modification DNA specificity domain.
 
  
 0.970
CUP89853.1
Probable type I restriction enzyme BthVORF4518P M protein.
 
 
 0.915
CUO96127.1
EcoKI restriction-modification system protein HsdS.
 
 
 0.914
vspIM
Modification methylase VspI.
 
   0.892
CUP89796.1
Type I restriction modification DNA specificity domain.
 
  
 0.821
CUP26689.1
Uncharacterised protein.
       0.746
hsdM
Type I restriction-modification system methyltransferase subunit.
 
 
 0.716
CUP19869.1
DNA methylase.
  
   0.641
CUP34407.1
DNA methylase.
  
   0.641
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
Server load: low (30%) [HD]