STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP27842.1FtsX-like permease family. (654 aa)    
Predicted Functional Partners:
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 
 0.982
graS_2
Sensor histidine kinase graS.
 
 
 0.912
graR_2
Glycopeptide resistance-associated protein R.
 
     0.875
macB_8
Macrolide export ATP-binding/permease protein MacB.
 0.851
macB_3
Macrolide export ATP-binding/permease protein MacB.
 0.819
ftsE_2
Cell division ATP-binding protein FtsE.
 0.811
graS_1
Sensor histidine kinase graS.
 
 
 0.757
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 0.754
graS_3
Sensor histidine kinase graS.
 
 
 0.746
graS_4
Sensor histidine kinase graS.
 
 
 0.688
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.