STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP31498.1Uncharacterised protein. (113 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
    
  0.867
CUP31456.1
Protein of uncharacterised function (DUF3847).
       0.783
CUP31525.1
Uncharacterised protein.
       0.779
CUP87922.1
Helix-turn-helix domain.
  
     0.775
CUP31552.1
Helix-turn-helix domain.
  
     0.774
mobA_1
DNA strand transferase.
  
     0.771
CUP31608.1
Uncharacterised protein.
  
     0.713
CUP87878.1
Uncharacterised protein.
  
     0.707
CUP88103.1
Resolvase%2C N terminal domain.
  
     0.696
CUP88074.1
Predicted P-loop ATPase and inactivated derivatives.
  
     0.693
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.