STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP33505.1Protein of uncharacterised function (DUF3795). (110 aa)    
Predicted Functional Partners:
CUP33473.1
DNA alkylation repair enzyme.
 
     0.805
CUP33435.1
Protein of uncharacterised function (DUF3788).
 
     0.762
CUP33575.1
Flavin reductase like domain.
 
     0.717
CUP33529.1
Uncharacterised protein.
       0.714
CUP33567.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.688
cmlA
Chloramphenicol acetyltransferase 2.
 
     0.638
CUP33396.1
Fosfomycin resistance protein FosB.
       0.613
CUP34458.1
Uncharacterised protein.
  
     0.560
CUP33613.1
Uncharacterised protein.
       0.543
CUP33665.1
Uncharacterised protein.
 
     0.533
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.