STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP34348.1Uncharacterised protein. (107 aa)    
Predicted Functional Partners:
CUP34288.1
Domain of uncharacterised function (DUF3846).
       0.773
CUP34318.1
Uncharacterised protein.
       0.773
CUP34362.1
Protein of uncharacterised function (DUF3848).
       0.773
CUP34381.1
tRNA(1-methyladenosine) methyltransferase and related methyltransferases.
       0.498
CUP34159.1
Uncharacterised protein.
       0.417
CUP34192.1
Uncharacterised protein.
       0.417
CUP34213.1
Protein of uncharacterised function (DUF3801).
       0.417
CUP34242.1
Relaxase/Mobilisation nuclease domain.
       0.417
CUP34267.1
Bacterial mobilisation protein (MobC).
       0.417
traG_1
Conjugal transfer protein traG.
       0.403
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.