STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD_4Lipoprotein-releasing system ATP-binding protein LolD. (169 aa)    
Predicted Functional Partners:
macB_5
Macrolide export ATP-binding/permease protein MacB.
  0.962
CUP33861.1
Acidobacterial duplicated orphan permease.
  
 0.951
CUP47105.1
ABC exporter transmembrane subunit%2C DevC protein.
  
 0.951
cusS
Sensor kinase CusS.
   
   0.597
CUP76157.1
Fluoroquinolones export ATP-binding protein Rv2688c/MT2762.
  
     0.579
znuC
Zinc import ATP-binding protein ZnuC.
  
     0.577
mprA_1
Mycobacterial persistence regulator A.
      0.576
artQ
Arginine transport system permease protein ArtQ.
 
  
  0.566
CUP06028.1
Putative multidrug export ATP-binding/permease protein SAV1866.
  
     0.555
apxIB
RTX-I toxin determinant B.
  
     0.542
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.