Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUP38662.1 | CUP38849.1 | ERS852525_01588 | ERS852525_01594 | TRAP-type C4-dicarboxylate transport system%2C small permease component. | NADH oxidase. | 0.554 |
| CUP38662.1 | aroD | ERS852525_01588 | ERS852525_01589 | TRAP-type C4-dicarboxylate transport system%2C small permease component. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.470 |
| CUP38662.1 | gltC_2 | ERS852525_01588 | ERS852525_01592 | TRAP-type C4-dicarboxylate transport system%2C small permease component. | HTH-type transcriptional regulator gltC; Belongs to the LysR transcriptional regulatory family. | 0.588 |
| CUP38662.1 | siaP | ERS852525_01588 | ERS852525_01586 | TRAP-type C4-dicarboxylate transport system%2C small permease component. | Neu5Ac-binding protein. | 0.980 |
| CUP38662.1 | ydiM | ERS852525_01588 | ERS852525_01590 | TRAP-type C4-dicarboxylate transport system%2C small permease component. | Inner membrane transport protein ydiM. | 0.787 |
| CUP38849.1 | CUP38662.1 | ERS852525_01594 | ERS852525_01588 | NADH oxidase. | TRAP-type C4-dicarboxylate transport system%2C small permease component. | 0.554 |
| CUP38849.1 | aroD | ERS852525_01594 | ERS852525_01589 | NADH oxidase. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.536 |
| CUP38849.1 | aroE_1 | ERS852525_01594 | ERS852525_01591 | NADH oxidase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.643 |
| CUP38849.1 | aroE_2 | ERS852525_01594 | ERS852525_01643 | NADH oxidase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.501 |
| CUP38849.1 | gltC_2 | ERS852525_01594 | ERS852525_01592 | NADH oxidase. | HTH-type transcriptional regulator gltC; Belongs to the LysR transcriptional regulatory family. | 0.752 |
| CUP38849.1 | gltC_3 | ERS852525_01594 | ERS852525_01593 | NADH oxidase. | HTH-type transcriptional regulator gltC; Belongs to the LysR transcriptional regulatory family. | 0.802 |
| CUP38849.1 | metH | ERS852525_01594 | ERS852525_00490 | NADH oxidase. | Methionine synthase. | 0.550 |
| CUP38849.1 | pheA | ERS852525_01594 | ERS852525_01624 | NADH oxidase. | P-protein. | 0.521 |
| CUP38849.1 | ydiM | ERS852525_01594 | ERS852525_01590 | NADH oxidase. | Inner membrane transport protein ydiM. | 0.840 |
| aroD | CUP38662.1 | ERS852525_01589 | ERS852525_01588 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | TRAP-type C4-dicarboxylate transport system%2C small permease component. | 0.470 |
| aroD | CUP38849.1 | ERS852525_01589 | ERS852525_01594 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | NADH oxidase. | 0.536 |
| aroD | aroE_1 | ERS852525_01589 | ERS852525_01591 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.998 |
| aroD | aroE_2 | ERS852525_01589 | ERS852525_01643 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.989 |
| aroD | gltC_2 | ERS852525_01589 | ERS852525_01592 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | HTH-type transcriptional regulator gltC; Belongs to the LysR transcriptional regulatory family. | 0.575 |
| aroD | pheA | ERS852525_01589 | ERS852525_01624 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | P-protein. | 0.620 |
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