STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfT_2Energy-coupling factor transporter transmembrane protein EcfT. (250 aa)    
Predicted Functional Partners:
ykoD
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.995
ecfA1
Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.989
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.988
bioY2
Biotin ECF transporter S component BioY2.
  
 0.986
CUP41331.1
Conserved hypothetical integral membrane protein.
     0.951
panT
Pantothenic acid ECF transporter S component PanT.
   
 
 0.924
CUP64870.1
Predicted membrane protein.
  
 
 0.909
irtA
Iron import ATP-binding/permease protein IrtA.
 
  
  0.877
CUP41246.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
  
  0.867
cfaD
Colonization factor antigen I subunit D.
 
     0.757
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.