Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP26720.1 | CUP42515.1 | ERS852525_01198 | ERS852525_01710 | Uncharacterised protein. | RNA polymerase sigma factor. | 0.706 |
CUP26720.1 | CUP42587.1 | ERS852525_01198 | ERS852525_01713 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.526 |
CUP26720.1 | CUP42677.1 | ERS852525_01198 | ERS852525_01717 | Uncharacterised protein. | Resolvase%2C N terminal domain. | 0.491 |
CUP26720.1 | parB_5 | ERS852525_01198 | ERS852525_01714 | Uncharacterised protein. | Probable chromosome-partitioning protein parB; Belongs to the ParB family. | 0.427 |
CUP42465.1 | CUP42515.1 | ERS852525_01708 | ERS852525_01710 | Uncharacterised protein. | RNA polymerase sigma factor. | 0.770 |
CUP42465.1 | CUP42587.1 | ERS852525_01708 | ERS852525_01713 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.720 |
CUP42465.1 | CUP42677.1 | ERS852525_01708 | ERS852525_01717 | Uncharacterised protein. | Resolvase%2C N terminal domain. | 0.671 |
CUP42465.1 | parB_5 | ERS852525_01708 | ERS852525_01714 | Uncharacterised protein. | Probable chromosome-partitioning protein parB; Belongs to the ParB family. | 0.596 |
CUP42515.1 | CUP26720.1 | ERS852525_01710 | ERS852525_01198 | RNA polymerase sigma factor. | Uncharacterised protein. | 0.706 |
CUP42515.1 | CUP42465.1 | ERS852525_01710 | ERS852525_01708 | RNA polymerase sigma factor. | Uncharacterised protein. | 0.770 |
CUP42515.1 | CUP42587.1 | ERS852525_01710 | ERS852525_01713 | RNA polymerase sigma factor. | Plasmid recombination enzyme. | 0.713 |
CUP42515.1 | CUP42677.1 | ERS852525_01710 | ERS852525_01717 | RNA polymerase sigma factor. | Resolvase%2C N terminal domain. | 0.715 |
CUP42515.1 | parB_5 | ERS852525_01710 | ERS852525_01714 | RNA polymerase sigma factor. | Probable chromosome-partitioning protein parB; Belongs to the ParB family. | 0.571 |
CUP42587.1 | CUP26720.1 | ERS852525_01713 | ERS852525_01198 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.526 |
CUP42587.1 | CUP42465.1 | ERS852525_01713 | ERS852525_01708 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.720 |
CUP42587.1 | CUP42515.1 | ERS852525_01713 | ERS852525_01710 | Plasmid recombination enzyme. | RNA polymerase sigma factor. | 0.713 |
CUP42587.1 | CUP42634.1 | ERS852525_01713 | ERS852525_01715 | Plasmid recombination enzyme. | Uncharacterized protein conserved in bacteria. | 0.833 |
CUP42587.1 | CUP42658.1 | ERS852525_01713 | ERS852525_01716 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.474 |
CUP42587.1 | CUP42677.1 | ERS852525_01713 | ERS852525_01717 | Plasmid recombination enzyme. | Resolvase%2C N terminal domain. | 0.843 |
CUP42587.1 | parB_5 | ERS852525_01713 | ERS852525_01714 | Plasmid recombination enzyme. | Probable chromosome-partitioning protein parB; Belongs to the ParB family. | 0.956 |
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