Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP03610.1 | CUP47219.1 | ERS852525_00435 | ERS852525_01871 | CarD-like/TRCF domain. | Uncharacterised protein. | 0.830 |
CUP03610.1 | rpoA | ERS852525_00435 | ERS852525_02725 | CarD-like/TRCF domain. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.943 |
CUP03610.1 | rpoB | ERS852525_00435 | ERS852525_00078 | CarD-like/TRCF domain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
CUP03610.1 | rpoC | ERS852525_00435 | ERS852525_00077 | CarD-like/TRCF domain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.952 |
CUP03610.1 | rpoZ | ERS852525_00435 | ERS852525_00821 | CarD-like/TRCF domain. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.946 |
CUP47219.1 | CUP03610.1 | ERS852525_01871 | ERS852525_00435 | Uncharacterised protein. | CarD-like/TRCF domain. | 0.830 |
CUP47219.1 | CUP47241.1 | ERS852525_01871 | ERS852525_01872 | Uncharacterised protein. | Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase. | 0.664 |
CUP47219.1 | CUP47270.1 | ERS852525_01871 | ERS852525_01873 | Uncharacterised protein. | Uncharacterised protein. | 0.687 |
CUP47219.1 | phoB_1 | ERS852525_01871 | ERS852525_01870 | Uncharacterised protein. | Phosphate regulon transcriptional regulatory protein phoB. | 0.768 |
CUP47219.1 | rpoA | ERS852525_01871 | ERS852525_02725 | Uncharacterised protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.861 |
CUP47219.1 | rpoB | ERS852525_01871 | ERS852525_00078 | Uncharacterised protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.879 |
CUP47219.1 | rpoC | ERS852525_01871 | ERS852525_00077 | Uncharacterised protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.867 |
CUP47219.1 | rpoZ | ERS852525_01871 | ERS852525_00821 | Uncharacterised protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.861 |
CUP47219.1 | srrB | ERS852525_01871 | ERS852525_01869 | Uncharacterised protein. | Sensor protein srrB. | 0.737 |
CUP47219.1 | tipA_1 | ERS852525_01871 | ERS852525_01162 | Uncharacterised protein. | HTH-type transcriptional activator tipA. | 0.597 |
CUP47241.1 | CUP47219.1 | ERS852525_01872 | ERS852525_01871 | Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase. | Uncharacterised protein. | 0.664 |
CUP47241.1 | CUP47270.1 | ERS852525_01872 | ERS852525_01873 | Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase. | Uncharacterised protein. | 0.760 |
CUP47241.1 | phoB_1 | ERS852525_01872 | ERS852525_01870 | Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase. | Phosphate regulon transcriptional regulatory protein phoB. | 0.704 |
CUP47241.1 | srrB | ERS852525_01872 | ERS852525_01869 | Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase. | Sensor protein srrB. | 0.700 |
CUP47270.1 | CUP47219.1 | ERS852525_01873 | ERS852525_01871 | Uncharacterised protein. | Uncharacterised protein. | 0.687 |
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