STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adaA_2Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. (296 aa)    
Predicted Functional Partners:
araC_2
Arabinose operon regulatory protein.
 
 0.889
ypdC
Uncharacterized HTH-type transcriptional regulator ypdC.
 
 0.883
porA
Pyruvate synthase subunit porA.
    
 0.858
btr_1
Bacillibactin transport regulator.
  
  
  0.797
melR_2
Melibiose operon regulatory protein.
  
 
   0.786
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.784
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.741
araC_1
Arabinose operon regulatory protein.
 
0.703
adaA_3
Methylphosphotriester-DNA--protein-cysteine S-methyltransferase.
 
0.703
adaA_4
Methylphosphotriester-DNA--protein-cysteine S-methyltransferase.
 
0.702
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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