STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP52279.1Uncharacterised protein. (150 aa)    
Predicted Functional Partners:
CUP52253.1
Uncharacterised protein.
       0.800
CUP52239.1
Uncharacterised protein.
       0.769
pilT
Twitching mobility protein.
       0.749
CUP52208.1
Uncharacterised protein.
       0.747
gspF
Type IV pilin biogenesis protein.
       0.726
CUP52150.1
Uncharacterized protein involved in cytokinesis%2C contains TGc (transglutaminase/protease-like) domain.
       0.593
CUP52132.1
DNA-binding transcriptional activator of the SARP family.
       0.433
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.