STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arlSSignal transduction histidine-protein kinase ArlS. (394 aa)    
Predicted Functional Partners:
tcrA
Transcriptional regulatory protein tcrA.
  0.975
arcB_1
Aerobic respiration control sensor protein ArcB.
 
  0.909
tlpA
Cytochrome c biogenesis protein tlpA.
 
   0.885
yccM_2
Putative electron transport protein yccM.
 
     0.867
srrA_7
Staphylococcal respiratory response protein A.
 
  0.803
hssR
Heme response regulator hssR.
 
  0.798
CUP10522.1
Blue-light-activated protein.
 
0.792
yycF
Transcriptional regulatory protein YycF.
 
  0.769
phoP_4
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
 
  0.763
srrA_4
Staphylococcal respiratory response protein A.
 
  0.742
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.