STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP53323.1Addiction module toxin%2C RelE/StbE family. (109 aa)    
Predicted Functional Partners:
CUP53298.1
Addiction module antitoxin%2C RelB/DinJ family.
 
 
   0.973
CUP70577.1
Phd_YefM.
 
     0.755
CUP78996.1
Addiction module antitoxin%2C RelB/DinJ family.
 
 
   0.716
CUP42948.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.630
CUP38048.1
Uncharacterised protein.
   
   0.494
CUP53339.1
Uncharacterised protein.
       0.454
CUP19252.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.406
CUP19830.1
Prevent-host-death family protein.
 
     0.406
CUP90844.1
Prevent-host-death family protein.
 
     0.406
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.