STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP58322.1FtsX-like permease family. (676 aa)    
Predicted Functional Partners:
lolD_8
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.962
macB_9
Macrolide export ATP-binding/permease protein MacB.
 
   0.842
lolD_7
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.836
phoR_6
Alkaline phosphatase synthesis sensor protein phoR.
     0.824
lolD_5
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.815
macB_7
Macrolide export ATP-binding/permease protein MacB.
 
   0.807
phoR_4
Alkaline phosphatase synthesis sensor protein phoR.
     0.764
srrB
Sensor protein srrB.
 
     0.710
phoP_3
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
 
     0.686
CUP14196.1
FtsX-like permease family.
  
     0.684
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.