STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP62874.1Uncharacterized conserved protein. (227 aa)    
Predicted Functional Partners:
CUP63096.1
N-glycosyltransferase.
     0.987
CUP62903.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
     0.931
ydjZ_2
TVP38/TMEM64 family inner membrane protein ydjZ.
 
     0.782
CUP62859.1
C_GCAxxG_C_C family protein.
       0.778
ydjZ_3
TVP38/TMEM64 family inner membrane protein ydjZ.
 
     0.760
ynjB
ABC-type uncharacterized transport system%2C periplasmic component.
 
     0.756
potH
Putrescine transport system permease protein PotH.
 
     0.754
gltC_4
HTH-type transcriptional regulator gltC; Belongs to the LysR transcriptional regulatory family.
       0.718
rihB
Pyrimidine-specific ribonucleoside hydrolase rihB.
 
     0.710
ydcV
Inner membrane ABC transporter permease protein ydcV.
 
     0.699
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.