STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potHPutrescine transport system permease protein PotH. (287 aa)    
Predicted Functional Partners:
potD
Spermidine/putrescine-binding periplasmic protein precursor.
 
 
0.999
ydcV
Inner membrane ABC transporter permease protein ydcV.
 
 0.999
potA_4
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 0.997
ynjB
ABC-type uncharacterized transport system%2C periplasmic component.
 
  
  0.995
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.991
potA_1
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 0.955
potB
Spermidine/putrescine transport system permease protein PotB.
  
  
 
0.910
rihB
Pyrimidine-specific ribonucleoside hydrolase rihB.
 
     0.897
CUO97610.1
2-aminoethylphosphonate ABC transporter substrate-binding protein.
 
  
  0.819
fbpC2_1
Fe(3+) ions import ATP-binding protein FbpC 2.
 
 0.819
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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