STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hom_1Homoserine dehydrogenase. (428 aa)    
Predicted Functional Partners:
thrA
Aspartokinase I/homoserine dehydrogenase I; Belongs to the aspartokinase family.
 0.968
lysC
Aspartokinase 2; Belongs to the aspartokinase family.
 0.967
thrC
Threonine synthase.
 
 0.915
metH
Methionine synthase.
  
 
 0.914
asd2
Aspartate-semialdehyde dehydrogenase 2; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 0.908
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
 
 0.858
ilvE
Branched-chain-amino-acid aminotransferase.
  
 
 0.855
metB
Cystathionine gamma-synthase.
  
 
 0.854
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
   
 
 0.838
serB
Phosphoserine phosphatase.
  
 
 0.812
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.