STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcuSSensor histidine kinase DcuS. (280 aa)    
Predicted Functional Partners:
mrkE
Two-component response regulator.
 
  
 0.962
siaP
Neu5Ac-binding protein.
    
 0.808
CUP10522.1
Blue-light-activated protein.
     
 0.769
CUP80396.1
Putative accessory gene regulator protein.
 
  
  0.746
CUP64204.1
GTP cyclohydrolase III.
  
 0.682
arcB_1
Aerobic respiration control sensor protein ArcB.
     
 0.677
CUP67002.1
Uncharacterised protein.
     
 0.677
CUP64345.1
NfeD-like C-terminal%2C partner-binding.
       0.661
qmcA
FtsH protease regulator HflK.
       0.661
CUP68627.1
Uncharacterised protein.
  
 0.633
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.