STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP64442.1Uncharacterised protein. (170 aa)    
Predicted Functional Partners:
CUP64467.1
(dimethylallyl)adenosine tRNA methylthiotransferase.
       0.817
ssb_2
Helix-destabilizing protein.
 
     0.785
maeB
NADP-dependent malic enzyme.
       0.783
CUP50083.1
Replication initiation/membrane attachment protein.
  
     0.766
dnaI
Primosomal protein DnaI; Belongs to the DnaA family.
  
     0.732
secA_1
Predicted metal-binding protein related to the C-terminal domain of SecA.
  
     0.633
ywiB
Uncharacterized beta-barrel protein ywiB.
  
     0.617
dnaX_1
DNA polymerase III subunit tau.
  
    0.603
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
     0.602
CUP60212.1
Small%2C acid-soluble spore proteins%2C alpha/beta type.
  
     0.593
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.