STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylHXylose transport system permease protein xylH; Belongs to the binding-protein-dependent transport system permease family. (386 aa)    
Predicted Functional Partners:
sbpA
Multiple sugar-binding periplasmic protein sbpA precursor.
 
 0.993
xylG
Xylose import ATP-binding protein XylG.
 
 0.982
xylF
D-xylose-binding periplasmic protein precursor.
 
 0.973
rbsB_1
D-ribose-binding periplasmic protein precursor.
  
  0.971
araG
Arabinose import ATP-binding protein AraG.
 
 0.914
ytfQ_1
ABC transporter periplasmic-binding protein ytfQ precursor.
  
  0.897
rbsA_2
Ribose import ATP-binding protein RbsA.
 
 0.895
mglA
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.887
rbsB_3
D-ribose-binding periplasmic protein precursor.
  
  0.797
ytfQ_2
ABC transporter periplasmic-binding protein ytfQ precursor.
 
  
  0.774
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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