STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP65180.1L-fucose isomerase and related proteins. (494 aa)    
Predicted Functional Partners:
CUP65165.1
Uncharacterised protein.
 
   
 0.939
xylB
Xylulose kinase.
 
 
 0.908
fucK
L-fuculokinase.
 
 
 0.701
CUO93894.1
Putative sialic acid transporter.
 
  
 0.608
xylH
Xylose transport system permease protein xylH; Belongs to the binding-protein-dependent transport system permease family.
 
     0.561
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
  
 
 0.549
sbpA
Multiple sugar-binding periplasmic protein sbpA precursor.
 
     0.524
mlc_1
Making large colonies protein.
 
  
 0.470
xylG
Xylose import ATP-binding protein XylG.
       0.460
mlc_2
Making large colonies protein.
 
  
 0.455
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.