STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP68627.1Uncharacterised protein. (439 aa)    
Predicted Functional Partners:
bmr3
Multidrug-efflux transporter 3.
 
     0.794
arcB_1
Aerobic respiration control sensor protein ArcB.
    
 0.789
CUP67002.1
Uncharacterised protein.
    
 0.789
CUP56432.1
Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase.
  
 0.633
CUP56947.1
Sensory histidine kinase DcuS.
  
 0.633
dcuS
Sensor histidine kinase DcuS.
  
 0.633
yxeP_2
Uncharacterized hydrolase YxeP.
 
     0.566
CUP10522.1
Blue-light-activated protein.
    
 0.474
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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