STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP80396.1Putative accessory gene regulator protein. (194 aa)    
Predicted Functional Partners:
dpiB
Sensor histidine kinase DpiB.
 
 
  0.910
mbtB
Phenyloxazoline synthase MbtB.
 
     0.856
sfp_2
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
 
     0.837
CUP12124.1
Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase.
 
 
  0.784
CUP80415.1
Cyclic lactone autoinducer peptide.
       0.773
umuD
LexA repressor.
  
     0.765
CUP55794.1
Sensory histidine kinase DcuS.
 
 
  0.761
CUP80465.1
Acetoacetate metabolism regulatory protein AtoC.
 
    0.761
dhbE
2%2C3-dihydroxybenzoate-AMP ligase.
 
     0.756
dcuS
Sensor histidine kinase DcuS.
 
  
  0.746
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.