STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
era_2SGP. (415 aa)    
Predicted Functional Partners:
bioB_1
Biotin synthase.
   
 0.986
CUP03193.1
Putative iron-only hydrogenase system regulator.
 
   
 0.869
thiH
2-iminoacetate synthase.
   
 0.818
CUO92410.1
Iron hydrogenase 1.
 
   
 0.788
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.780
CUP08102.1
Iron hydrogenase 1.
 
     0.758
typA
Tyrosine phosphorylated protein A.
  
  
 0.592
cmk
Cytidylate kinase.
  
  
 0.591
dnaG_2
DNA primase.
  
    0.536
CUP81084.1
Iron hydrogenase 1.
 
     0.524
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.