STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhNADP-dependent alcohol dehydrogenase. (344 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
    
 0.964
fruA
EIIABC-Fru.
  
 
 0.920
ptsG
EIICBA-Glc.
   
 
 0.838
calB
Coniferyl aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.791
rocA
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.791
gltD_1
Glutamate synthase [NADPH] small chain.
    
  0.777
mutT
8-oxo-dGTP diphosphatase.
 
      0.721
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.625
CUP83840.1
Conjugal transfer protein TrbP.
       0.601
yvgN
Glyoxal reductase.
  
 0.566
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.