STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traCDNA primase TraC. (672 aa)    
Predicted Functional Partners:
CUP57570.1
DNA repair protein RadC.
      0.900
CUP85092.1
Uncharacterised protein.
     0.896
CUP85138.1
Uncharacterised protein.
 
     0.872
cwlS_2
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS precursor.
 
     0.845
CUP57503.1
Uncharacterised protein.
 
      0.819
dnaG_4
DNA primase.
 
     0.818
CUP85017.1
Uncharacterised protein.
       0.773
CUP85033.1
Uncharacterised protein.
       0.773
CUP53552.1
Relaxase/Mobilisation nuclease domain.
 
     0.756
CUP53678.1
Protein of uncharacterised function (DUF3801).
  
     0.746
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.