STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traG_4Conjugal transfer protein traG. (259 aa)    
Predicted Functional Partners:
CUP32012.1
Type IV secretory pathway%2C VirD4 components.
 
     0.976
CUP87831.1
Maff2 family.
 
     0.877
CUP89259.1
Type IV secretory pathway%2C VirD4 components.
 
    0.876
CUP31427.1
Type IV secretory pathway%2C VirB4 components.
 
    0.777
CUP88157.1
Type IV secretory pathway%2C VirB4 components.
 
    0.777
CUP87823.1
Uncharacterised protein.
       0.773
CUP88126.1
Uncharacterised protein.
 
     0.771
CUP57612.1
Type IV secretory pathway%2C VirB4 components.
 
    0.762
CUP37497.1
Type IV secretory pathway%2C VirB4 components.
 
    0.730
CUP32038.1
Protein of uncharacterised function (DUF3801).
 
     0.709
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.