STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP90108.1DNA segregation ATPase FtsK/SpoIIIE and related proteins. (351 aa)    
Predicted Functional Partners:
CUP88736.1
Replication initiation factor.
 
    0.809
CUP53415.1
Plasmid maintenance system antidote protein.
 
    0.805
CUP41432.1
Bacterial protein of uncharacterised function (DUF961).
 
    0.796
CUP90073.1
Bacterial protein of uncharacterised function (DUF961).
 
    0.796
CUP41408.1
Bacterial protein of uncharacterised function (DUF961).
 
    0.781
iap_2-2
Uncharacterised protein.
  
    0.781
CUP90050.1
Bacterial protein of uncharacterised function (DUF961).
 
    0.781
CUP67328.1
RNA polymerase sigma factor.
  
     0.760
CUP88551.1
Uncharacterized protein conserved in bacteria.
  
     0.760
CUP67354.1
Helix-turn-helix domain.
  
     0.755
Your Current Organism:
Coprococcus comes
NCBI taxonomy Id: 410072
Other names: ATCC 27758, C. comes, VPI C1-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.