STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE42616.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (507 aa)    
Predicted Functional Partners:
SEE42581.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.747
SEE42498.1
Alpha/beta hydrolase family protein.
   
   0.689
SEE42540.1
3-ketosteroid 9alpha-monooxygenase subunit B.
       0.660
SEC22939.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.607
SEB80832.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.598
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.570
SED39727.1
Acetyl esterase/lipase.
 
 
  0.530
SEE42456.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
       0.479
atpG
F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.453
SED90793.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.429
Your Current Organism:
Gordonia malaquae
NCBI taxonomy Id: 410332
Other names: CCUG 53555, DSM 45064, G. malaquae, Gordonia malaquae Yassin et al. 2007, IMMIB WWCC-22, JCM 14874, NBRC 108250
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