STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0158PFAM: nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (110 aa)    
Predicted Functional Partners:
Mlab_0157
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; TC 1.A.11.
  
 
 0.989
Mlab_0989
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; TC 1.A.11.
  
 
 0.964
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
 0.957
Mlab_1306
PFAM: ADP-ribosylation/Crystallin J1.
   
 
 0.804
Mlab_1638
PFAM: ADP-ribosylation/Crystallin J1.
   
 
 0.804
Mlab_0393
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.770
Mlab_0475
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.770
Mlab_0516
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.770
Mlab_0678
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.770
Mlab_0727
SMART: Tetratricopeptide domain protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
   
 
 0.770
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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