STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0165Nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family. (268 aa)    
Predicted Functional Partners:
Mlab_0163
PFAM: oxidoreductase/nitrogenase, component 1.
 
 0.996
Mlab_0164
PFAM: oxidoreductase/nitrogenase, component 1.
 
 0.987
Mlab_1260
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
 
 0.925
Mlab_0866
PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
 
 0.924
Mlab_0706
Glutamate dehydrogenase (NAD/NADP); PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.915
Mlab_1041
Nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
  
 
0.903
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.903
hcp-2
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.903
Mlab_1039
PFAM: oxidoreductase/nitrogenase, component 1.
 
 
 0.870
Mlab_0520
Nitrogenase molybdenum-iron protein alpha and beta chains-like protein.
 
 
 0.772
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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