STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0211Ferredoxin-thioredoxin reductase catalytic subunit-like protein. (98 aa)    
Predicted Functional Partners:
Mlab_0213
Conserved hypothetical protein.
 
     0.621
Mlab_0212
PFAM: formylmethionine deformylase.
       0.598
Mlab_0210
PFAM: extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
       0.538
Mlab_0670
PFAM: SufBD protein.
 
   
 0.450
Mlab_0311
PFAM: Thioredoxin domain.
   
 
 0.436
Mlab_0760
PFAM: Thioredoxin domain.
   
 
 0.436
Mlab_0815
Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
   
 
 0.436
Mlab_0421
Conserved hypothetical protein.
  
     0.409
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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