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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0237PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (93 aa)    
Predicted Functional Partners:
Mlab_0238
Formylmethanofuran dehydrogenase, subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.999
Mlab_0240
CoB--CoM heterodisulfide reductase subunit B; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein.
   
 
 0.999
Mlab_0243
Formylmethanofuran dehydrogenase, subunit D; PFAM: molydopterin dinucleotide-binding region.
 
 
 0.989
Mlab_0462
Formate dehydrogenase, beta subunit (F420); PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
 
 
  0.947
Mlab_1058
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
 
 
  0.947
Mlab_0241
CoB--CoM heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
  
   0.941
Mlab_0239
Heterodisulfide reductase subunit C-like protein.
   
 
 0.940
Mlab_0242
PFAM: methyl-viologen-reducing hydrogenase, delta subunit.
   
   0.935
Mlab_0398
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.934
ftr
Formylmethanofuran-tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
    
 0.929
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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