STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0305Cysteine protease-like protein. (571 aa)    
Predicted Functional Partners:
Mlab_1524
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type.
  
 
 0.832
Mlab_0446
Phospholipid-binding protein-like protein.
   
 
 0.806
Mlab_1400
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; TGS domain protein.
    
   0.764
Mlab_0751
PFAM: GTP-binding protein, HSR1-related; Miro domain protein.
   
 0.615
rps11
SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
   
 0.487
Mlab_0625
SMART: AAA ATPase; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5.
   
 0.476
Mlab_1017
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
 0.476
Mlab_1124
SMART: AAA ATPase; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2.
   
 0.476
Mlab_0311
PFAM: Thioredoxin domain.
   
 0.453
Mlab_0760
PFAM: Thioredoxin domain.
   
 0.453
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.