STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_0339PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein. (111 aa)    
Predicted Functional Partners:
Mlab_0341
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase.
 
  
 0.915
Mlab_0340
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
  
 0.909
Mlab_0342
PFAM: protein of unknown function DUF134.
 
  
 0.712
Mlab_0338
PFAM: protein of unknown function DUF364.
 
     0.656
Mlab_0730
PFAM: protein of unknown function DUF134; Sigma-70, region 4 type 2.
 
  
 0.613
Mlab_0337
PFAM: protein of unknown function UPF0066.
       0.544
Mlab_0165
Nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.533
Mlab_1041
Nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.533
Mlab_0336
PFAM: Radical SAM domain protein.
 
     0.495
Mlab_1025
Tungstate/molybdate binding protein.
  
  
 0.473
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.